R Notebook
Load required libraries
library("hdxstats")
library("dplyr")
library("ggplot2")
library("RColorBrewer")
library("tidyr")
library("pheatmap")
library("scales")
library("viridis")
library("patchwork")
library("Biostrings")
library("xfun")
library("tidyverse")source("R/test_script_app2.R")Parsing Raw Data
Parse input raw data and output QFeatures object instance given a CSV file path for different test cases.
# First test case
csv_filepath <- "/homes/sanjuan/R/x86_64-pc-linux-gnu-library/4.1/hdxstats/extdata/MBP.csv"
# CASE 1: Parse data, given input data file path + parameter file
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/myparameters.hdxp")
# CASE 2: Parse data, given input data file path + list of parameters
data <- read_csv(csv_filepath)
myparameters <- make_parameter_file(data)
hdx_data <- extract_hdx_data(csv_filepath, parameters = myparameters)
# CASE 3: Parse data, given input data file path. Work out parameters for pre-processing using interactive mode
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/myparameters.hdxp")Data Analysis of Deuterium Uptake Kinetics
TEST 1:
Perform Data Analysis: Plain fitting
- Deuterium-update fitting for all peptides
- Plain fitting - not comparing against a reference state or condition
# INPUT
data_selection <- hdx_data[,1:24]
all_peptides <- rownames(data_selection)[[1]]
starting_parameters <- list(a = NULL, b = 0.001, d = NULL, p = 1)
# OUTPUT
results <- analyse_kinetics(data = data_selection,
method = "fit",
peptide_selection = all_peptides,
start = starting_parameters)results$methodVisualise Output from Data Analysis
View fitting curves of Deu-uptake kinetics for all available conditions associated to selected peptides
graphics_kinetics <- visualise_hdx_data(results, type="kinetics")
graphics_kinetics[[1]] | graphics_kinetics[[2]] | graphics_kinetics[[3]]View forest plots showing the difference between uptake measurements between conditions, plus the dispersion between their respective fitting model parameters
graphics_forest <- visualise_hdx_data(results, type="forest")
graphics_forest[[1]] | graphics_forest[[2]] | graphics_forest[[3]]Combine graphical outputs in a single canvas
graphics_forest[[1]] | graphics_kinetic[[1]]Display numerical values as a table
graphics_forest[[1]]$dataPerform Data Analysis: Differential fitting
- Deuterium-update fitting for data selection
- Differential fitting - with respect to a single reference peptide
# INPUT
data_selection <- hdx_data[,1:100]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL, b = 0.0001, d = NULL, p = 1)
# OUTPUT
results <- analyse_kinetics(data = data_selection,
method = "dfit",
peptide_selection = all_peptides[37],
start = starting_parameters)
graphics_kinetics <- visualise_hdx_data(results, type="kinetics")View graphical output for reference peptide shown in LHS Top corner.
graphics_kineticsTEST CASE 2
Single-domain antibody (sdAb) binding assays to HOIP.
csv_filepath <- "/home/sanjuan/R/x86_64-pc-linux-gnu-library/4.2/hdxstats/extdata/N64184_1a2_state.csv" data <- read_csv(csv_filepath)Rows: 3600 Columns: 16
── Column specification ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
Delimiter: ","
chr (3): Protein, Sequence, State
dbl (11): Start, End, MaxUptake, MHP, Exposure, Center, Center SD, Uptake, Uptake SD, RT, RT SD
lgl (2): Modification, Fragment
ℹ Use `spec()` to retrieve the full column specification for this data.
ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.make_parameter_file(data, save = "vignettes/data/N64184_1a2_state.hdxp")[1] "INFO: I found these columns in your input CSV file"
[1] "Protein" "Start" "End" "Sequence" "Modification" "Fragment" "MaxUptake" "MHP" "State"
[10] "Exposure" "Center" "Center SD" "Uptake" "Uptake SD" "RT" "RT SD"
[1] "INFO: Specify the column name indicating the starting peptide residue numbers... OR, enter NA"hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/N64184_1a2_state.hdxp")[1] "INFO: You gave me a CSV file of your HDX-MSM data"
[1] "INFO: I will pre-process your data parse it using QFeatures ..."
[1] "INFO: You provided a 'parameter_file', I will extract parameters from this to format your output QFeatures data object."
[1] "INFO: You provided a list of 'parameters', I will extract parameters from this to format your output QFeatures data object."
[1] "INFO: Stripped your 'Exposure_Time' values from non-numeric characters."
[1] "INFO: Your original_time_units == 'm'. I will convert your 'Exposure_Time' values to seconds (s)."
[1] "INFO: Your 'Replicate' column appears to be NA. I will add this column with 1 values just to label your data."
[1] "INFO: Your 'Charge' column appears to be NA. I will add this column with 0 values just to label your data."
[1] "INFO: Reformatting your data to a wide format..."
[1] "INFO: Parsing your data as a qDF object class instance. Method: parseDeutData"
[1] "WARNING: Your output data is not normalised."
[1] "WARNING: Your output data was not saved. You can provide an output path with 'save = my_path'"
[1] "INFO: I pre-processed you input CSV data content and now it's available as a QFeatures instance"# INPUT
data_selection <- hdx_data[,1:33]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL, b = 0.01, d = NULL)
formula = value ~ a * (1 - exp(-b*(timepoint))) + d
# OUTPUT
results <- analyse_kinetics(data = data_selection,
method = "dfit",
peptide_selection = all_peptides[3],
start = starting_parameters,
formula = formula)[1] "INFO: Performing differential fitting of Deuterium uptake kinetics. Method: 'hdxstats::differentialUptakeKinetics' "
[1] "INFO: You specified your own 'formula' for your fitting model."Warning in fitting_method(object = data, feature = peptide_selection, start = starting_parameters, :
NAs introduced by coerciongraphics <- visualise_hdx_data(results, type="kinetics")[1] "INFO: I found 11 models in your results data."custom_colors <- scale_color_manual(values = colorRampPalette(brewer.pal(8, name = "Set2"))(11))
graphics + custom_colorsScale for colour is already present.
Adding another scale for colour, which will replace the existing scale.
Remove intercept Deu uptake values
[1] "INFO: You have 110 peptide-charge paired values"
[1] "INFO: For GPGQECA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CAVCGWALPHNRM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CAVCGWALPHNRMQAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CAVCGWALPHNRMQALTSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For AVCGWALPHNRM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For AVCGWALPHNRMQAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For AVCGWALPHNRMQALTSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCGWALPHNRM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCGWALPHNRMQA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCGWALPHNRMQAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCGWALPHNRMQALTSC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCGWALPHNRMQALTSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WALPHNRM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WALPHNRMQA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WALPHNRMQAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WALPHNRMQALTS_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WALPHNRMQALTSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For QALTSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CTICPDC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CTICPDCF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For TICPDCF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FRQHFTIA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RQHFTIA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RQHFTIAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LKEKHITD_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LKEKHITDM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LKEKHITDMVC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For KEKHITDM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For KEKHITDMVC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For KEKHITDMVCPACGRPDLTDDTQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MVCPACGRPDLTD_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MVCPACGRPDLTDDTQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VCPACGRPDLTDDTQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For PACGRPDLTD_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For PACGRPDLTDDTQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For IQLRESLEPDA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LRESLEPDA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RESLEPDA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RESLEPDAY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RESLEPDAYAL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RESLEPDAYALF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RESLEPDAYALFHKKLTEGVL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For YALFHKKLTEGVL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ALFHKKLTEGVL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FHKKLTEGVL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For HKKLTEGVL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MRDPKFL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MRDPKFLWC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MRDPKFLWCAQ_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FIYEREQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For IYEREQL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For REQLEATCPQCHQTF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For EATCPQCHQTF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For EATCPQCHQTFC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CVRCKRQWEEQHRGRSCE_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CVRCKRQWEEQHRGRSCED_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CVRCKRQWEEQHRGRSCEDFQN_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For DFQNWKRMNDPEYQAQGLAM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FQNWKRMNDPEY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FQNWKRMNDPEYQAQGL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FQNWKRMNDPEYQAQGLAM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For FQNWKRMNDPEYQAQGLAMY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For WKRMNDPEYQAQGLAM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For KRMNDPEYQAQGLAM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For MYLQENGIDCPKCKF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For YLQENGIDCPKCKF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For YLQENGIDCPKCKFSY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For YLQENGIDCPKCKFSYA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LQENGIDCPKCKF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LQENGIDCPKCKFSYA_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For SYALARGGCMHF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For SYALARGGCMHFHCTQCRHQFCSGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LARGGCMHF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LARGGCMHFHCTQCRHQFCSGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LARGGCMHFHCTQCRHQFCSGCY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ARGGCMHFHCTQCRHQFCSGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For HFHCTQCRHQFCSGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For HCTQCRHQFCSGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For YAKNKCPEPNC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RVKKSLHGHHPRDCL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RVKKSLHGHHPRDCLF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LRLQKLLQDNN_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LRLQKLLQDNNVM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LRLQKLLQDNNVMF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RLQKLLQDNN_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
[1] "INFO: For RLQKLLQDNNVM_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RLQKLLQDNNVMF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For QKLLQDNN_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For QKLLQDNNVMF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LQDNNVMF_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For NTEPPAGARAVPGGG_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For NTEPPAGARAVPGGGC_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For NTEPPAGARAVPGGGCRV_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For NTEPPAGARAVPGGGCRVIEQ_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CQAHYKEYL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For CQAHYKEYLVS_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For HYKEYLVS_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For VSLINAHSLDPATL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LINAHSLDPATL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For INAHSLDPATL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LETATERYLHVRPQPLAGEDPPAY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ETATERYLHVRPQPLAGEDPPAY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ETATERYLHVRPQPLAGEDPPAYQ_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ATERYLHVRPQPLAGEDPPAY_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ATERYLHVRPQPLAGEDPPAYQ_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ATERYLHVRPQPLAGEDPPAYQARL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ERYLHVRPQPLAGEDPPAYQ_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For ERYLHVRPQPLAGEDPPAYQARL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For RYLHVRPQPLAGEDPPAYQARL_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: For LQKLTEEVPLGQSIPRRRK_0 , you have 11 conditions"
[1] "INFO: You have 1 replicates, for apo"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb13_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb25_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb27_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb2_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_1"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
[1] "INFO: You have 1 replicates, for dAb6_2"
[1] "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"Let’s select column data for the APO state and a bound state with a single domain antibody labelled as dAb25_1
data_selection <- hdx_data_nointercept[,c(1:3, 10:12)]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL)
formula = value ~ a * (1 - exp(-0.05*(timepoint)))
results <- analyse_kinetics(data = data_selection,
method = "fit",
peptide_selection = all_peptides,
start = starting_parameters,
formula = formula)[1] "INFO: Performing fitting of Deuterium uptake kinetics. Method: 'hdxstats::fitUptakeKinetics' "Let’s have look at some of the data analysis output data
results$functional_analysis@resultsDataFrame with 110 rows and 8 columns
Fstat.Fstat Fstat.numerator Fstat.denomenator pvals fdr ebayes.pvals ebayes.fdr
<list> <list> <list> <numeric> <numeric> <numeric> <numeric>
GPGQECA_0 0.505943 0.0236133 0.0466718 0.516181 0.652643 0.479007 0.612683
CAVCGWALPHNRM_0 0.819962 0.0111598 0.0136102 0.416403 0.558589 0.406959 0.545920
CAVCGWALPHNRMQAL_0 3.18841 0.130744 0.0410059 0.148709 0.320744 0.123017 0.300707
CAVCGWALPHNRMQALTSCE_0 1.51203 0.598316 0.395703 0.286210 0.499732 0.237829 0.441045
AVCGWALPHNRM_0 0.138914 0.00401256 0.0288852 0.728272 0.801099 0.708845 0.779730
... ... ... ... ... ... ... ...
ATERYLHVRPQPLAGEDPPAYQARL_0 0.882916 0.0634907 0.0719102 0.400605 0.557804 0.3563859 0.502596
ERYLHVRPQPLAGEDPPAYQ_0 0.841277 0.0671491 0.0798181 0.410930 0.558053 0.3658748 0.509446
ERYLHVRPQPLAGEDPPAYQARL_0 2.11026 0.172771 0.081872 0.219967 0.443454 0.1817334 0.386882
RYLHVRPQPLAGEDPPAYQARL_0 1.65969 0.120275 0.0724686 0.267115 0.481684 0.2263725 0.436859
LQKLTEEVPLGQSIPRRRK_0 4.48223 0.196504 0.0438406 0.101671 0.266280 0.0814249 0.246599
fitcomplete
<integer>
GPGQECA_0 1
CAVCGWALPHNRM_0 2
CAVCGWALPHNRMQAL_0 3
CAVCGWALPHNRMQALTSCE_0 4
AVCGWALPHNRM_0 5
... ...
ATERYLHVRPQPLAGEDPPAYQARL_0 106
ERYLHVRPQPLAGEDPPAYQ_0 107
ERYLHVRPQPLAGEDPPAYQARL_0 108
RYLHVRPQPLAGEDPPAYQARL_0 109
LQKLTEEVPLGQSIPRRRK_0 110which(results$functional_analysis@results$ebayes.fdr < 0.05) IQLRESLEPDA_0 RESLEPDAYALFHKKLTEGVL_0 YALFHKKLTEGVL_0 REQLEATCPQCHQTF_0 EATCPQCHQTF_0
36 42 43 52 53
MYLQENGIDCPKCKF_0 YLQENGIDCPKCKFSYA_0 LQENGIDCPKCKFSYA_0
65 68 70 graphics <- visualise_hdx_data(results, type="kinetics")[1] "INFO: I found 110 models in your results data."graphics[[36]] +
graphics[[42]] +
graphics[[43]] +
graphics[[65]] +
graphics[[68]] +
graphics[[70]] +
graphics[[52]] +
graphics[[53]] +
plot_layout(guides = 'collect')
#graphics <- visualise_hdx_data(results, data_selection=data_selection, type="manhatten", reference = NULL)# <<<<--- NEXT
n_cols <- length(as.vector(colnames(data_selection))$incoperation)
message <- paste("INFO: I found",n_cols,"columns in your data selection. I will split your data selection into two and take their difference.")
print(message)[1] "INFO: I found 6 columns in your data selection. I will split your data selection into two and take their difference."print(colnames(assay(data_selection)[,1:(n_cols/2)]))[1] "X0rep1condapo" "X30rep1condapo" "X300rep1condapo"print(colnames(assay(data_selection)[,(1+n_cols/2):n_cols]))[1] "X0rep1conddAb25_1" "X30rep1conddAb25_1" "X300rep1conddAb25_1"data_diff <- assay(data_selection)[,(1+n_cols/2):n_cols] - assay(data_selection)[,1:(n_cols/2)]
graphics <- list()
for (i in 1:(n_cols/2)){
graphics[i] <- manhattanplot(params = results$functional_analysis,
sequences = rownames(results$functional_analysis@results),
region = as.data.frame(data_selection@metadata)[, c("Start", "End")],
difference = data_diff[,i],
nrow = 1)
}Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.message <- paste("INFO: You have ", length(graphics), "Manhattan plots")
print(message)[1] "INFO: You have 3 Manhattan plots"graphics[[2]] + plot_layout(guides = 'collect')
graphics_manhatten <- visualise_hdx_data(results, data_selection= data_selection, type="manhatten")[1] "INFO: I found 6 columns in your data selection. I will split your data selection into two and take their difference."
[1] "X0rep1condapo" "X30rep1condapo" "X300rep1condapo"
[1] "X0rep1conddAb25_1" "X30rep1conddAb25_1" "X300rep1conddAb25_1"
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
[1] "INFO: You have 3 Manhattan plots"graphics_manhatten[[2]] / graphics_manhatten[[3]] + plot_layout(guides = 'collect')
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap
fpath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
HOIPfasta <- readAAStringSet(filepath = fpath, "fasta")
scores <- results$functional_analysis@results$ebayes.fdr
out <- plotEpitopeMap(AAString = HOIPfasta[[1]],
peptideSeqs = unlist(lapply(strsplit(rownames(assay(hdx_data_nointercept)), split="_"), function(x) head(x,n=1))),
numlines = 2,
maxmismatch = 2,
by = 1, # NOTE: What's the role of this arg that's never called in function?
scores = 1 * (-log10(scores[unique(rownames(assay(hdx_data_nointercept)))]) > -log10(0.05)) + 0.0001,
name = "significant")Warning in brewer.pal(n = 2, name = "Set2") :
minimal value for n is 3, returning requested palette with 3 different levelsScale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.out[[1]]/(out[[2]]) + plot_layout(guides = 'collect') & theme(legend.position = "right")
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap
fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
data_selection <- hdx_data_nointercept
#################################
fasta_data <- readAAStringSet(filepath = fasta, "fasta")
message <- paste("INFO: You input FASTA file contains", length(fasta_data), ". I will take the first entry by default.")
print(message)[1] "INFO: You input FASTA file contains 16 . I will take the first entry by default."scores <- results$functional_analysis@results$ebayes.fdr
peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))
# NOTE: What about the charged states? Do they get usually ignored?
graphics <- plotEpitopeMap(AAString = fasta_data[[1]],
peptideSeqs = peptide_sequences,
numlines = 2,
maxmismatch = 2,
by = 1, # NOTE: What's the role of this arg that's never called in function?
scores = 1 * (-log10(scores[unique(peptide_charge_names)]) > -log10(0.05)) + 0.0001,
name = "significant")Warning in brewer.pal(n = 2, name = "Set2") :
minimal value for n is 3, returning requested palette with 3 different levelsScale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.graphics[[1]]/(graphics[[2]]) + plot_layout(guides = 'collect') & theme(legend.position = "right")
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
graphics_epitope <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = fasta_filepath)[1] "INFO: You input FASTA file contains 16 . I will take the first entry by default."Warning in brewer.pal(n = 2, name = "Set2") :
minimal value for n is 3, returning requested palette with 3 different levelsScale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
[1] "INFO: You have 2 parts for your Epitope map"graphics_epitope[[1]]/(graphics_epitope[[2]]) +
plot_layout(guides = 'collect') & theme(legend.position = "right")
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap
scores <- results$functional_analysis@results$ebayes.fdr
out2 <- plotEpitopeMapResidue(AAString = HOIPfasta[[1]],
peptideSeqs = unlist(lapply(strsplit(rownames(assay(hdx_data_nointercept)), split="_"), function(x) head(x,n=1))),
numlines = 2,
maxmismatch = 1,
by = 5,
scores = scores[unique(rownames(assay(hdx_data_nointercept)))],
name = "-log10 p value")Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.out2[[1]]/out2[[2]] + plot_layout(guides = 'collect') & theme(legend.position = "right")
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap
fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
#######################################
fasta_data <- readAAStringSet(filepath = fasta, "fasta")
message <- paste("INFO: You input FASTA file contains", length(fasta_data), ". I will take the first entry by default.")
print(message)[1] "INFO: You input FASTA file contains 16 . I will take the first entry by default."peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))
scores <- results$functional_analysis@results$ebayes.fdr
graphics_epitope <- plotEpitopeMapResidue(AAString = fasta_data[[1]],
peptideSeqs = peptide_sequences,
numlines = 2,
maxmismatch = 1,
by = 5,
scores = scores[unique(peptide_charge_names)],
name = "-log10 p value")Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.graphics_epitope[[1]]/graphics_epitope[[2]] + plot_layout(guides = 'collect') & theme(legend.position = "right")
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
graphics_epitope <- visualise_hdx_data(results, type="epitope", level="residue", fasta = fasta_filepath)[1] "INFO: You input FASTA file contains 16 . I will take the first entry by default."
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
[1] "INFO: You have 2 parts for your Epitope map"graphics_epitope[[1]]/(graphics_epitope[[2]]) +
plot_layout(guides = 'collect') & theme(legend.position = "right")
Map data onto PDB
Load essential libraries
library("NGLVieweR")
library("tidyverse")
library("RColorBrewer")
library("scales")
library("comprehenr")
library("bio3d")Map protection/deprotection heatmaps onto PDB
source("R/pdb-visualisation.R")scores <- results$functional_analysis@results$ebayes.fdr
peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))
graphics_data <- ComputeAverageMap(AAString = fasta_data[[1]],
peptideSeqs = unique(peptide_sequences),
numlines = 2, maxmismatch = 1,
by = 10, scores = scores[unique(peptide_charge_names)],
name = "-log10 p value")dataset <- graphics_data
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
mycolor_parameters <- hdx_to_pdb_colours(dataset, pdb_filepath)[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are 0" "Your scale limits are 1.37"
[1] "Your values will be coloured using Viridis"
graphics <- NGLVieweR(pdb_filepath) %>%
stageParameters(backgroundColor = "white", zoomSpeed = 1) %>%
addRepresentation("cartoon") %>%
addRepresentation("cartoon", param = list(color=mycolor_parameters, backgroundColor="white")) #%>%
#setSpin()graphicsProtection/Deprotection heatmap
fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
fasta_data <- readAAStringSet(filepath = fasta, "fasta")
scores <- results$functional_analysis@results$ebayes.fdr
peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))
n_cols <- length(as.vector(colnames(data_selection))$incoperation)
message <- paste("INFO: I found",n_cols,"columns in your data selection. I will split your data selection into two and take their difference.")
print(message)[1] "INFO: I found 6 columns in your data selection. I will split your data selection into two and take their difference."print(colnames(assay(data_selection)[,1:(n_cols/2)]))[1] "X0rep1condapo" "X30rep1condapo" "X300rep1condapo"print(colnames(assay(data_selection)[,(1+n_cols/2):n_cols]))[1] "X0rep1conddAb25_1" "X30rep1conddAb25_1" "X300rep1conddAb25_1"hdx_average <- ComputeAverageMap(AAString = fasta_data[[1]],
peptideSeqs = unique(peptide_sequences),
numlines = 2,
maxmismatch = 1,
by = 10,
scores = scores[unique(peptide_charge_names)],
name = "-log10 p value")
hdx_diff <- list()
graphics <- list()
qDF <- data_selection
for (i in 1:(n_cols/2)){
hdx_diff[[i]] <- hdxdifference(object = data_selection,
AAString = fasta_data[[1]],
peptideSeqs = unique(peptide_sequences),
numlines = 1,
maxmismatch = 1,
by = 10,
scores = scores[unique(peptide_charge_names)],
cols = c(i,(n_cols/2 + i)),
name = "-log10 p value (signed)")
graphics[[i]] <- hdxheatmap(averageMaps = list(hdx_average), diffMaps = list(hdx_diff[[i]]$diffMap))
}Scale for y is already present.
Adding another scale for y, which will replace the existing scale.Warning in hdxdifference(object = data_selection, AAString = fasta_data[[1]], :
NaNs producedScale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.message <- paste("INFO: You have ", length(graphics), "Protection/Deprotection heatmaps")
print(message)[1] "INFO: You have 3 Protection/Deprotection heatmaps"graphics[[3]][[1]] / graphics[[3]][[2]] + plot_layout(guides = 'collect') & theme(legend.position = "right")
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
qDF <- data_selection
graphics_protection <- visualise_hdx_data(results,
type="protection",
data_selection=data_selection,
level="residue",
fasta = fasta_filepath)[1] "INFO: I found 6 columns in your data selection. I will split your data selection into two and take their difference."
[1] "X0rep1condapo" "X30rep1condapo" "X300rep1condapo"
[1] "X0rep1conddAb25_1" "X30rep1conddAb25_1" "X300rep1conddAb25_1"
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.Warning in hdxdifference(object = data_selection, AAString = fasta_data[[1]], :
NaNs producedScale for y is already present.
Adding another scale for y, which will replace the existing scale.
Scale for y is already present.
Adding another scale for y, which will replace the existing scale.
[1] "INFO: You have 3 Protection/Deprotection heatmaps"graphics <- graphics_protection
graphics[[2]][[1]] / graphics[[2]][[2]] +
plot_layout(guides = 'collect') & theme(legend.position = "right")
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
graphics <- list()
for (i in 1:(n_cols/2)){
graphics_data <- hdx_average + sign(hdx_diff[[i]]$diffMap)
mycolor_parameters <- hdx_to_pdb_colours(graphics_data, pdb, cmap_name = "ProtDeprot")
graphics[[i]] <- NGLVieweR(pdb_filepath) %>%
stageParameters(backgroundColor = "white", zoomSpeed = 1) %>%
addRepresentation("cartoon") %>%
addRepresentation("cartoon", param = list(color=mycolor_parameters, backgroundColor="Prot"))
}[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are 0" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"
[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are 0" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"
[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are -0.39" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"graphics[[3]]pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
graphics_pdbview <- visualise_hdx_data(results,
data_selection=data_selection,
type="protection",
level="residue",
fasta=fasta_filepath,
pdb=pdb_filepath)[1] "INFO: I found 6 columns in your data selection. I will split your data selection into two and take their difference."
[1] "X0rep1condapo" "X30rep1condapo" "X300rep1condapo"
[1] "X0rep1conddAb25_1" "X30rep1conddAb25_1" "X300rep1conddAb25_1"Warning in hdxdifference(object = data_selection, AAString = fasta_data[[1]], :
NaNs produced[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are 0" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"
[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are 0" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"
[1] "Your HDX input dataset has 379 entries"
[1] "And excluding NA data you only have 379 entries"
[1] "However, your input PDB has only 286 residues in total"
[1] "Your scale limits are -0.39" "Your scale limits are 2.37"
[1] "Negative values will be coloured in Blue, and positive ones on Red"TEST CASE 3
Original raw data
#csv_filepath <- "inst/extdata/Project_2_SecA_Cluster_Data.csv"
#data <- read_csv(csv_filepath)
#data$Replicate <- unlist(lapply(strsplit(data$File, split="_"), function(x) tail(x, n=1)))
#write_csv(data, file = "inst/extdata/Project_2_SecA_Cluster_Data_edited.csv")
csv_filepath <- "inst/extdata/Project_2_SecA_Cluster_Data_edited.csv"Had to pre-process its content to add Replicate column
#data <- read_csv(csv_filepath)
#make_parameter_file(data, save = "vignettes/data/Project_2_SecA_Cluster_Data.hdxp")hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/Project_2_SecA_Cluster_Data.hdxp")pheatmap(t(assay(hdx_data)),
cluster_rows = FALSE,
cluster_cols = FALSE,
color = brewer.pal(n = 9, name = "BuPu"),
main = "secA heatmap",
fontsize = 14,
legend_breaks = c(0, 1, 2, 3, 4, 5, 6, max(assay(hdx_data))),
legend_labels = c("0", "1", "2", "3", "4", "5", "6", "Incorporation"))# Find out how many unique peptides and charge states exist
length(rownames(assay(hdx_data)))
# Extract all column values for a given peptide and charge state ( all states, all replicates, all timepoints)
peptide_charge <- "VIMDF_1" # "SSQYESAL_1"
Deu_min_global <- apply(assay(hdx_data), 1, function(x) min(x, na.rm = TRUE))[[peptide_charge]]
peptide_charge_data <- as.data.frame(assay(hdx_data))[peptide_charge, ]
peptide_charge_data <- longFormat(peptide_charge_data)
peptide_charge_data$condition <- as.factor(str_match(peptide_charge_data$colname, "cond\\s*(.*)")[, 2]) # Modify this for data analysis functions since they expect a numeric for replicates
peptide_charge_conditions <- unique(peptide_charge_data$condition)
# For a fixed confition
state <- "SecAYEG_AMPPNP"
ldf <- peptide_charge_data %>% subset(condition == state)
ldf$timepoint <- as.numeric(str_match(ldf$colname, "X\\s*(.*?)\\s*rep")[, 2])
ldf$replicates <- as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])
# Identify if number of replicates for 0 timepoint match for subsequent timepoints and report if not the case
#sum(ldf$timepoint == 0)
#length(unique(ldf$timepoint))
ldf$replicates <- unlist(lapply(strsplit(as.vector(as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])), split="_"), function(x) tail(x, n=1)))
# Subtract Deu uptake value at 0 timepoint
replicate_number <- 3
single_replicate_data <- ldf %>% subset(replicates == replicate_number)
x <- single_replicate_data %>% subset(timepoint == 0) # NOTE: Sometimes there will be more than one 0 timepoint
message <- paste("INFO: You have", length(x$value),"Deu uptake values for the zero timepoint.")
print(message)
if (all(is.na(x$value))){
message <- "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
print(message)
single_replicate_data$value <- single_replicate_data$value - Deu_min_global
print(single_replicate_data)
}else{
message <- "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
print(message)
Deu_min <- min(x$value, na.rm = TRUE)
print("BEFORE")
print(single_replicate_data)
single_replicate_data$value <- single_replicate_data$value - Deu_min
print("AFTER")
print(single_replicate_data)
}message <-paste("INFO: You have", length(rownames(assay(hdx_data))), "peptide-charge paired values")
print(message)
ldf_new <- rbind()
for (peptide_charge in rownames(assay(hdx_data))){
peptide_charge_data <- as.data.frame(assay(hdx_data))[peptide_charge, ]
peptide_charge_data <- longFormat(peptide_charge_data)
peptide_charge_data$condition <- as.factor(str_match(peptide_charge_data$colname, "cond\\s*(.*)")[, 2])
Deu_min_global <- apply(assay(hdx_data), 1, function(x) min(x, na.rm = TRUE))[[peptide_charge]]
peptide_charge_conditions <- unique(peptide_charge_data$condition)
message <- paste("INFO: For ", peptide_charge, ", you have", length(peptide_charge_conditions), "conditions")
print(message)
#ldf_new <- rbind()
for (state in peptide_charge_conditions){
ldf <- peptide_charge_data %>% subset(condition == state)
ldf$timepoint <- as.numeric(str_match(ldf$colname, "X\\s*(.*?)\\s*rep")[, 2])
ldf$replicates <- as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])
ldf$replicates <- unlist(lapply(strsplit(as.vector(as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])), split="_"), function(x) tail(x, n=1)))
# Subtract Deu uptake value at 0 timepoint
message <- paste("INFO: You have", length(unique(ldf$replicates)), "replicates, for", state)
print(message)
for (n_replicate in unique(ldf$replicates)){
single_replicate_data <- ldf %>% subset(replicates == n_replicate)
x <- single_replicate_data %>% subset(timepoint == 0)
if (all(is.na(x$value))){
message <- "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
print(message)
single_replicate_data$value <- single_replicate_data$value - Deu_min_global
#print(single_replicate_data)
ldf_new <- rbind(ldf_new, single_replicate_data)
}else{
message <- "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
print(message)
Deu_min <- min(x$value, na.rm = TRUE)
single_replicate_data$value <- single_replicate_data$value - Deu_min
#print(single_replicate_data)
ldf_new <- rbind(ldf_new, single_replicate_data)
}
}
}
}
x <- DataFrame(ldf_new)
x_wide <- pivot_wider(data.frame(x), values_from = value, id_cols = rowname, names_from = colname)
x_wide_df <- DataFrame(x_wide)
x_wide_df$rownames <- x_wide$rowname
qFeat <- readQFeatures(data.frame(x_wide_df), ecol = 1:ncol(assay(hdx_data)), name = names(hdx_data), fnames = "rownames")#graphics <- visualise_hdx_data(results, type="kinetics") # READY
#graphics <- visualise_hdx_data(results, type="forest") # READY
# NOTE: This only works to compare ONLY TWO distinct conditions, for the same timepoint, for all peptide fragments
# This needs to define a BASELINE state/condition and an ALTERNATE sate/condition
# NOTE: Data must be normalised by intercept
#graphics <- visualise_hdx_data(results, type="manhatten", reference = NULL)# <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap # <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap # <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", pdb="my_pdb_path") # Return heatmap projected onto PDB # <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="protection", level="peptide") # Return heatmap for peptide residue-number ranges
graphics <- visualise_hdx_data(results, type="protection", level="residue", fasta = "my_fasta_path") # Return heatmap
graphics <- visualise_hdx_data(results, type="protection", level="residue", pdb="my_pdb_path") # Return heatmap projected onto PDB
# GUI: Make GUI by assembling these building blocks
---
title: "R Notebook"
output: html_notebook
---

# Load required libraries

```{r}
library("hdxstats")
library("dplyr")
library("ggplot2")
library("RColorBrewer")
library("tidyr")
library("pheatmap")
library("scales")
library("viridis")
library("patchwork")
library("Biostrings")
library("xfun")
library("tidyverse")
```

```{r}
source("R/test_script_app2.R")
```


# Parsing Raw Data

Parse input raw data and output `QFeatures` object instance given a CSV file path for different test cases.

```{r}
# First test case
csv_filepath <- "/homes/sanjuan/R/x86_64-pc-linux-gnu-library/4.1/hdxstats/extdata/MBP.csv"

# CASE 1: Parse data, given input data file path + parameter file
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/myparameters.hdxp")

# CASE 2: Parse data, given input data file path + list of parameters
data <- read_csv(csv_filepath)
myparameters <- make_parameter_file(data)
hdx_data <- extract_hdx_data(csv_filepath, parameters = myparameters)

# CASE 3: Parse data, given input data file path. Work out parameters for pre-processing using interactive mode

```


```{r}
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/myparameters.hdxp")
```


# Data Analysis of Deuterium Uptake Kinetics

## TEST 1:

### Perform Data Analysis: Plain fitting

* Deuterium-update fitting for all peptides
* Plain fitting - not comparing against a reference state or condition

```{r}
# INPUT
data_selection <- hdx_data[,1:24]
all_peptides <- rownames(data_selection)[[1]]
starting_parameters <- list(a = NULL, b = 0.001,  d = NULL, p = 1)
# OUTPUT
results <- analyse_kinetics(data = data_selection, 
                            method = "fit", 
                            peptide_selection = all_peptides, 
                            start = starting_parameters)
```

```{r}
results$method
```

### Visualise Output from Data Analysis

View fitting curves of Deu-uptake kinetics for all available conditions associated to selected peptides

```{r, fig.width= 22, fig.height = 7}
graphics_kinetics <- visualise_hdx_data(results, type="kinetics") 
graphics_kinetics[[1]] | graphics_kinetics[[2]] | graphics_kinetics[[3]]
```

View forest plots showing the difference between uptake measurements between conditions, plus the dispersion between their respective fitting model parameters

```{r, fig.width= 22, fig.height = 10}
graphics_forest <- visualise_hdx_data(results, type="forest")
graphics_forest[[1]] | graphics_forest[[2]] | graphics_forest[[3]]
```

Combine graphical outputs in a single canvas

```{r, fig.width= 22, fig.height = 10}
graphics_forest[[1]] | graphics_kinetic[[1]]
```
Display numerical values as a table 

```{r}
graphics_forest[[1]]$data
```

### Perform Data Analysis: Differential fitting

* Deuterium-update fitting for data selection 
* Differential fitting - with respect to a *single reference* peptide

```{r}
# INPUT 
data_selection <- hdx_data[,1:100]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL, b = 0.0001,  d = NULL, p = 1)

# OUTPUT
results <- analyse_kinetics(data = data_selection, 
                            method = "dfit", 
                            peptide_selection = all_peptides[37], 
                            start = starting_parameters)

```

```{r}
graphics_kinetics <- visualise_hdx_data(results, type="kinetics")
```

View graphical output for reference peptide shown in LHS Top corner. 

```{r}
graphics_kinetics
```

## TEST CASE 2

Single-domain antibody (sdAb) binding assays to HOIP.


```{r}
csv_filepath <- "/home/sanjuan/R/x86_64-pc-linux-gnu-library/4.2/hdxstats/extdata/N64184_1a2_state.csv" 
```


```{r}
data <- read_csv(csv_filepath)
make_parameter_file(data, save = "vignettes/data/N64184_1a2_state.hdxp")
```


```{r}
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/N64184_1a2_state.hdxp")
```


```{r}
# INPUT 
data_selection <- hdx_data[,1:33]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL, b = 0.01,  d = NULL)
formula = value ~ a * (1 - exp(-b*(timepoint))) + d

# OUTPUT
results <- analyse_kinetics(data = data_selection, 
                            method = "dfit", 
                            peptide_selection = all_peptides[3], 
                            start = starting_parameters,
                            formula = formula)
```


```{r}
graphics <- visualise_hdx_data(results, type="kinetics")

custom_colors <- scale_color_manual(values = colorRampPalette(brewer.pal(8, name = "Set2"))(11))
graphics + custom_colors
```

Remove intercept Deu uptake values 

```{r env, message = FALSE, warning = FALSE, echo = FALSE}
hdx_data_nointercept <- mynormalisehdx(hdx_data, method = "intercept")
```

Let's select column data for the APO state and a bound state with a single domain antibody labelled as `dAb25_1` 
```{r}
data_selection <- hdx_data_nointercept[,c(1:3, 10:12)]
all_peptides <- rownames(data_selection)[[1]] # get all peptides
starting_parameters <- list(a = NULL)
formula = value ~ a * (1 - exp(-0.05*(timepoint)))

results <- analyse_kinetics(data = data_selection,
                            method = "fit",
                            peptide_selection = all_peptides, 
                            start = starting_parameters,
                            formula = formula)
```
Let's have  look at some of the data analysis output data

```{r}
results$functional_analysis@results
```

```{r}
which(results$functional_analysis@results$ebayes.fdr < 0.05)
```

```{r}
graphics <- visualise_hdx_data(results, type="kinetics")
```

```{r, fig.width= 22, fig.height = 15}
graphics[[36]] + 
graphics[[42]] +
graphics[[43]] +
graphics[[65]] +
graphics[[68]] +
graphics[[70]] +
graphics[[52]] +
graphics[[53]] +
plot_layout(guides = 'collect')
```

```{r, fig.width= 12, fig.height = 4}
#graphics <- visualise_hdx_data(results, data_selection=data_selection, type="manhatten", reference = NULL)# <<<<--- NEXT
n_cols <- length(as.vector(colnames(data_selection))$incoperation)

message <- paste("INFO: I found",n_cols,"columns in your data selection. I will split your data selection into two and take their difference.")
print(message)
print(colnames(assay(data_selection)[,1:(n_cols/2)]))
print(colnames(assay(data_selection)[,(1+n_cols/2):n_cols]))

data_diff <- assay(data_selection)[,(1+n_cols/2):n_cols] - assay(data_selection)[,1:(n_cols/2)]

graphics <- list()
for (i in 1:(n_cols/2)){
    graphics[i] <- manhattanplot(params = results$functional_analysis,
                                 sequences = rownames(results$functional_analysis@results), 
                                 region = as.data.frame(data_selection@metadata)[, c("Start", "End")],
                                 difference = data_diff[,i],
                                 nrow = 1)
}

message <- paste("INFO: You have ", length(graphics), "Manhattan plots")
print(message)

graphics[[2]] + plot_layout(guides = 'collect')
```
```{r, fig.width= 12, fig.height = 4}
graphics_manhatten <- visualise_hdx_data(results, data_selection= data_selection, type="manhatten")
graphics_manhatten[[2]] / graphics_manhatten[[3]] + plot_layout(guides = 'collect')
```


```{r, fig.width= 12, fig.height = 4}
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap

fpath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
HOIPfasta <- readAAStringSet(filepath = fpath, "fasta")

scores <- results$functional_analysis@results$ebayes.fdr

out <- plotEpitopeMap(AAString = HOIPfasta[[1]],
                      peptideSeqs = unlist(lapply(strsplit(rownames(assay(hdx_data_nointercept)), split="_"), function(x) head(x,n=1))),
                      numlines = 2,
                      maxmismatch = 2,
                      by = 1, # NOTE: What's the role of this arg that's never called in function?
                      scores = 1 * (-log10(scores[unique(rownames(assay(hdx_data_nointercept)))])  > -log10(0.05)) + 0.0001,
                      name = "significant")

out[[1]]/(out[[2]]) + plot_layout(guides = 'collect') & theme(legend.position = "right")
```

```{r, fig.width= 12, fig.height = 4}
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap

fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
data_selection <- hdx_data_nointercept

#################################
fasta_data <- readAAStringSet(filepath = fasta, "fasta")
message <- paste("INFO: You input FASTA file contains", length(fasta_data), ". I will take the first entry by default.")
print(message)

scores <- results$functional_analysis@results$ebayes.fdr
peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))
# NOTE: What about the charged states? Do they get usually ignored?

graphics <- plotEpitopeMap(AAString = fasta_data[[1]],
                      peptideSeqs = peptide_sequences,
                      numlines = 2,
                      maxmismatch = 2,
                      by = 1, # NOTE: What's the role of this arg that's never called in function?
                      scores = 1 * (-log10(scores[unique(peptide_charge_names)])  > -log10(0.05)) + 0.0001,
                      name = "significant")

graphics[[1]]/(graphics[[2]]) + plot_layout(guides = 'collect') & theme(legend.position = "right")
```
```{r, fig.width= 12, fig.height = 4}
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
graphics_epitope <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = fasta_filepath)

graphics_epitope[[1]]/(graphics_epitope[[2]]) + 
plot_layout(guides = 'collect') & theme(legend.position = "right")
```



```{r, fig.width= 12, fig.height = 4}
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap

scores <- results$functional_analysis@results$ebayes.fdr
out2 <- plotEpitopeMapResidue(AAString = HOIPfasta[[1]],
                              peptideSeqs = unlist(lapply(strsplit(rownames(assay(hdx_data_nointercept)), split="_"), function(x) head(x,n=1))),
                              numlines = 2,
                              maxmismatch = 1,
                              by = 5,
                              scores = scores[unique(rownames(assay(hdx_data_nointercept)))],
                              name = "-log10 p value")

out2[[1]]/out2[[2]]  + plot_layout(guides = 'collect') & theme(legend.position = "right")
```

```{r, fig.width= 12, fig.height = 4}
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap

fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
#######################################
fasta_data <- readAAStringSet(filepath = fasta, "fasta")
message <- paste("INFO: You input FASTA file contains", length(fasta_data), ". I will take the first entry by default.")
print(message)

peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))

scores <- results$functional_analysis@results$ebayes.fdr

graphics_epitope <- plotEpitopeMapResidue(AAString = fasta_data[[1]],
                                          peptideSeqs = peptide_sequences,
                                          numlines = 2,
                                          maxmismatch = 1,
                                          by = 5,
                                          scores = scores[unique(peptide_charge_names)],
                                          name = "-log10 p value")

graphics_epitope[[1]]/graphics_epitope[[2]]  + plot_layout(guides = 'collect') & theme(legend.position = "right")
```

```{r, fig.width= 12, fig.height = 4}
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
graphics_epitope <- visualise_hdx_data(results, type="epitope", level="residue", fasta = fasta_filepath)

graphics_epitope[[1]]/(graphics_epitope[[2]]) + 
plot_layout(guides = 'collect') & theme(legend.position = "right")
```
Map data onto PDB

Load essential libraries

```{r,}
library("NGLVieweR")
library("tidyverse")
library("RColorBrewer")
library("scales")
library("comprehenr")
library("bio3d")
```

Map protection/deprotection heatmaps onto PDB

```{r}
source("R/pdb-visualisation.R")
```


```{r}
scores <- results$functional_analysis@results$ebayes.fdr

peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))

graphics_data <- ComputeAverageMap(AAString = fasta_data[[1]],
                            peptideSeqs = unique(peptide_sequences),
                            numlines = 2, maxmismatch = 1,
                            by = 10, scores = scores[unique(peptide_charge_names)],
                            name = "-log10 p value")
```


```{r}
dataset <- graphics_data
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
mycolor_parameters <- hdx_to_pdb_colours(dataset, pdb_filepath)
```


```{r}

graphics <- NGLVieweR(pdb_filepath) %>%
  stageParameters(backgroundColor = "white", zoomSpeed = 1) %>%
  addRepresentation("cartoon") %>%
  addRepresentation("cartoon", param = list(color=mycolor_parameters, backgroundColor="white")) #%>%
  #setSpin()
```


```{r}
graphics
```



```{r}
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
graphics_pdbview <- visualise_hdx_data(results, type="epitope", level="residue", fasta=fasta_filepath, pdb=pdb_filepath)

graphics_pdbview #%>% setSpin()
```


Protection/Deprotection heatmap 

```{r}
fasta <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
fasta_data <- readAAStringSet(filepath = fasta, "fasta")

scores <- results$functional_analysis@results$ebayes.fdr
peptide_charge_names <- rownames(results$functional_analysis@results)
peptide_sequences <- unlist(lapply(strsplit(peptide_charge_names, split="_"), function(x) head(x,n=1)))

n_cols <- length(as.vector(colnames(data_selection))$incoperation)

message <- paste("INFO: I found",n_cols,"columns in your data selection. I will split your data selection into two and take their difference.")
print(message)
print(colnames(assay(data_selection)[,1:(n_cols/2)]))
print(colnames(assay(data_selection)[,(1+n_cols/2):n_cols]))

hdx_average <- ComputeAverageMap(AAString = fasta_data[[1]],
                                 peptideSeqs = unique(peptide_sequences),
                                 numlines = 2, 
                                 maxmismatch = 1,
                                 by = 10, 
                                 scores = scores[unique(peptide_charge_names)],
                                 name = "-log10 p value")
hdx_diff <- list()
graphics <- list()
qDF <- data_selection
for (i in 1:(n_cols/2)){
    hdx_diff[[i]] <- hdxdifference(object = data_selection,
                                    AAString = fasta_data[[1]],
                                    peptideSeqs = unique(peptide_sequences),
                                    numlines = 2,
                                    maxmismatch = 1,
                                    by = 10,
                                    scores = scores[unique(peptide_charge_names)],
                                    cols = c(i,(n_cols/2 + i)),
                                    name = "-log10 p value (signed)")
    
    graphics[[i]] <- hdxheatmap(averageMaps = list(hdx_average), diffMaps = list(hdx_diff[[i]]$diffMap)) 
}

message <- paste("INFO: You have ", length(graphics), "Protection/Deprotection heatmaps")
print(message)
```

```{r, fig.width= 12, fig.height = 4}
graphics[[3]][[1]] / graphics[[3]][[2]] + plot_layout(guides = 'collect') & theme(legend.position = "right")
```

```{r}
fasta_filepath <- system.file("extdata", "HOIP.txt", package = "hdxstats", mustWork = TRUE)
qDF <- data_selection
graphics_protection <- visualise_hdx_data(results, 
                                          type="protection", 
                                          data_selection=data_selection,
                                          level="residue",
                                          fasta = fasta_filepath)
```

```{r, fig.width= 12, fig.height = 4}
graphics <- graphics_protection
graphics[[2]][[1]] / graphics[[2]][[2]] +
    plot_layout(guides = 'collect') & theme(legend.position = "right")
```

```{r}
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
graphics <- list()
for (i in 1:(n_cols/2)){
    graphics_data <- hdx_average + sign(hdx_diff[[i]]$diffMap)
    mycolor_parameters <- hdx_to_pdb_colours(graphics_data, pdb, cmap_name = "ProtDeprot")
    graphics[[i]] <- NGLVieweR(pdb_filepath) %>%
      stageParameters(backgroundColor = "white", zoomSpeed = 1) %>%
      addRepresentation("cartoon") %>%
      addRepresentation("cartoon", param = list(color=mycolor_parameters, backgroundColor="Prot"))
}
```

```{r}
graphics[[3]]
```

```{r}
pdb_filepath <- "vignettes/data/5edv_chainA_clean_renumbered.pdb"
graphics_pdbview <- visualise_hdx_data(results, 
                                       data_selection=data_selection,
                                       type="protection", 
                                       level="residue", 
                                       fasta=fasta_filepath, 
                                       pdb=pdb_filepath)
```
```{r}
graphics_pdbview[[3]] %>% setSpin()
```


# TEST CASE 3

Original raw data
```{r}
#csv_filepath <- "inst/extdata/Project_2_SecA_Cluster_Data.csv"
#data <- read_csv(csv_filepath)
#data$Replicate <- unlist(lapply(strsplit(data$File, split="_"), function(x) tail(x, n=1)))
#write_csv(data, file = "inst/extdata/Project_2_SecA_Cluster_Data_edited.csv")

csv_filepath <- "inst/extdata/Project_2_SecA_Cluster_Data_edited.csv"
```

Had to pre-process its content to add Replicate column

```{r}
#data <- read_csv(csv_filepath)
#make_parameter_file(data, save = "vignettes/data/Project_2_SecA_Cluster_Data.hdxp")
```

```{r}
hdx_data <- extract_hdx_data(csv_filepath, parameter_file = "vignettes/data/Project_2_SecA_Cluster_Data.hdxp")
```




```{r, fig.height = 20, fig.width = 80, fig.align = "center"}
pheatmap(t(assay(hdx_data)),
         cluster_rows = FALSE, 
         cluster_cols = FALSE,
         color = brewer.pal(n = 9, name = "BuPu"),
         main = "secA heatmap", 
         fontsize = 14,
         legend_breaks = c(0, 1, 2, 3, 4, 5, 6, max(assay(hdx_data))),
         legend_labels = c("0", "1", "2", "3", "4", "5", "6", "Incorporation"))
```


```{r}
# Find out how many unique peptides and charge states exist
length(rownames(assay(hdx_data)))
# Extract all column values for a given peptide and charge state ( all states, all replicates, all timepoints)
peptide_charge <- "VIMDF_1" # "SSQYESAL_1"
Deu_min_global <- apply(assay(hdx_data), 1, function(x) min(x, na.rm = TRUE))[[peptide_charge]]
peptide_charge_data <- as.data.frame(assay(hdx_data))[peptide_charge, ]
peptide_charge_data <- longFormat(peptide_charge_data)
peptide_charge_data$condition <- as.factor(str_match(peptide_charge_data$colname, "cond\\s*(.*)")[, 2]) # Modify this for data analysis functions since they expect a numeric for replicates
peptide_charge_conditions <- unique(peptide_charge_data$condition)
# For a fixed confition
state <- "SecAYEG_AMPPNP"
ldf <- peptide_charge_data %>% subset(condition == state)
ldf$timepoint <- as.numeric(str_match(ldf$colname, "X\\s*(.*?)\\s*rep")[, 2])
ldf$replicates <- as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])
# Identify if number of replicates for 0 timepoint match for subsequent timepoints and report if not the case
#sum(ldf$timepoint == 0)
#length(unique(ldf$timepoint))
ldf$replicates <- unlist(lapply(strsplit(as.vector(as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])), split="_"), function(x) tail(x, n=1)))

# Subtract Deu uptake value at 0 timepoint
replicate_number <- 3
single_replicate_data <- ldf %>% subset(replicates == replicate_number)
x <- single_replicate_data %>% subset(timepoint == 0) # NOTE: Sometimes there will be more than one 0 timepoint
message <- paste("INFO: You have", length(x$value),"Deu uptake values for the zero timepoint.")
print(message)

if (all(is.na(x$value))){
    message <- "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
    print(message)
    single_replicate_data$value <- single_replicate_data$value - Deu_min_global
    print(single_replicate_data)
}else{
    message <- "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
    print(message)
    Deu_min <- min(x$value, na.rm = TRUE)
    print("BEFORE")
    print(single_replicate_data)
    single_replicate_data$value <- single_replicate_data$value - Deu_min
    print("AFTER")
    print(single_replicate_data)
}
```


```{r}
message <-paste("INFO: You have", length(rownames(assay(hdx_data))), "peptide-charge paired values")
print(message)
ldf_new <- rbind()
for (peptide_charge in rownames(assay(hdx_data))){
  peptide_charge_data <- as.data.frame(assay(hdx_data))[peptide_charge, ]
  peptide_charge_data <- longFormat(peptide_charge_data)
  peptide_charge_data$condition <- as.factor(str_match(peptide_charge_data$colname, "cond\\s*(.*)")[, 2])
  
  Deu_min_global <- apply(assay(hdx_data), 1, function(x) min(x, na.rm = TRUE))[[peptide_charge]]
  
  peptide_charge_conditions <- unique(peptide_charge_data$condition)
  message <- paste("INFO: For ", peptide_charge, ", you have", length(peptide_charge_conditions), "conditions")
  print(message)
  
  #ldf_new <- rbind()
  for (state in peptide_charge_conditions){
    ldf <- peptide_charge_data %>% subset(condition == state)
    ldf$timepoint <- as.numeric(str_match(ldf$colname, "X\\s*(.*?)\\s*rep")[, 2])
    ldf$replicates <- as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])
    
    ldf$replicates <- unlist(lapply(strsplit(as.vector(as.factor(str_match(ldf$colname, "rep\\s*(.*)\\s*cond")[, 2])), split="_"), function(x) tail(x, n=1)))
    # Subtract Deu uptake value at 0 timepoint
    message <- paste("INFO: You have", length(unique(ldf$replicates)), "replicates, for", state)
    print(message)
    
    for (n_replicate in unique(ldf$replicates)){
      single_replicate_data <- ldf %>% subset(replicates == n_replicate)
      x <- single_replicate_data %>% subset(timepoint == 0)
      
      if (all(is.na(x$value))){
        message <- "INFO: All Deu uptake values for the zero timepoint are NA. I will take the minimum across all conditions."
        print(message)
        single_replicate_data$value <- single_replicate_data$value - Deu_min_global
        #print(single_replicate_data)
        ldf_new <- rbind(ldf_new, single_replicate_data)
        }else{
            message <- "INFO: At least one Deu uptake values for the zero timepoint is NA. I will take the minimum of all zero timepoints"
            print(message)
            Deu_min <- min(x$value, na.rm = TRUE)
            single_replicate_data$value <- single_replicate_data$value - Deu_min
            #print(single_replicate_data)
            ldf_new <- rbind(ldf_new, single_replicate_data)
        }
    }
  }
}

x <- DataFrame(ldf_new)
x_wide <- pivot_wider(data.frame(x), values_from = value, id_cols = rowname, names_from = colname)
x_wide_df <- DataFrame(x_wide)
x_wide_df$rownames <- x_wide$rowname
qFeat <- readQFeatures(data.frame(x_wide_df), ecol = 1:ncol(assay(hdx_data)), name = names(hdx_data), fnames = "rownames")
```


```{r}
#graphics <- visualise_hdx_data(results, type="kinetics") # READY
#graphics <- visualise_hdx_data(results, type="forest") # READY

# NOTE: This only works to compare ONLY TWO distinct conditions, for the same timepoint, for all peptide fragments
# This needs to define a BASELINE state/condition and an ALTERNATE sate/condition
# NOTE: Data must be normalised by intercept 
#graphics <- visualise_hdx_data(results, type="manhatten", reference = NULL)# <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="peptide", fasta = "my_fasta_path") # Return an EpitopeMap # <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", fasta = "my_fasta_path") # Return heatmap # <<<<--- NEXT
#graphics <- visualise_hdx_data(results, type="epitope", level="residue", pdb="my_pdb_path") # Return heatmap projected onto PDB # <<<<--- NEXT

#graphics <- visualise_hdx_data(results, type="protection", level="peptide") # Return heatmap for peptide residue-number ranges
graphics <- visualise_hdx_data(results, type="protection", level="residue", fasta = "my_fasta_path") # Return heatmap
graphics <- visualise_hdx_data(results, type="protection", level="residue", pdb="my_pdb_path") # Return heatmap projected onto PDB

# GUI: Make GUI by assembling these building blocks

```

